Furthermore, collaboration with colleagues will be easier than ever because MacVector lets you customize graphic results and export them for high-quality printing. You'll be amazed at how quickly you can flow from task to task with just a few mouse clicks. MacClade MacroCAIC MacT MacVector MAFFT MALIGN MANTiS MAPPS Mavric. With MacVector, you can view the results of any analysis in graphical or text format.Īll analysis, editing, and display functions are contained within a single application, so not only will you find MacVector remarkably user-friendly, but you'll also save time, whether you're exploring gene relationships, predicting coding sequences, or conducting cloning experiments. Phylogenetic inference step Poisson Model Protein Model Protein Sequence Quartets. MacVector is a complex tool that provides sequence editing, primer design, Internet database searches, protein analysis, sequence confirmation, contig assembly capabilities, multiple sequence alignment, phylogenetic reconstruction, coding region analysis, Researchers who want a simple, but comprehensive, desktop sequence analysis application continually turn to MacVector, the leading sequence analysis package for the Macintosh. It features an intuitive interface that integrates a wide variety of industry standard analysis and data mining algorithms into a single application. Terms of Use.MacVector is a general DNA and Protein sequence analysis, manipulation and documentation program. However, you can also compare a protein sequence to a DNA sequence to identify weak relationships between a protein sequence and a related protein-encoding DNA sequence.Ĭopyright © 2022 MacVector, Inc. Pairs of protein sequences can be scanned for sequence similarity to each other using the Dot-Plot functionality, in a similar way to DNA sequences. In addition to creating the corresponding DNA sequence, MacVector can also scan the sequence for the least degenerate nucleotide sequences than can be used as probes or PCR primers to identify those sequences in a genomic library.
#Macvector protein sequence software#
software packages macvector 7 2 3 About News Press Release. Home > MacVector > software packages macvector 7 2 3. ZERO BIAS - scores, article reviews, protocol conditions and more. Bioz Stars score: 86/100, based on 1 PubMed citations.
#Macvector protein sequence code#
You can reverse translate a protein into its equivalent degenerate DNA sequence using the translation code of your choosing. Software Packages Macvector 7 2 3, supplied by MacVector, used in various techniques. MacVector ships with a number of default amino acid subsequence files derived from the popular PROSITE database. However, you can use subsequences with complex patterns for the search - each pattern can have up to three distinct segments, separated by variable inter-segment regions, and you can control the overall similarity required for a match as well as defining residues which must be 100% conserved. MacVector can search for Amino Acid subsequences using a very similar approach to the Proteolytic Enzyme searching functionality. The results can be viewed in text or graphical format, with similar filtering options to those available for restriction enzyme searches. MacVector provides a reference file containing all of the currently known useful proteolytic enzymes and you can add your own using the built-in editor. MacVector lets you scan a protein sequence for proteolytic enzyme cleavage sites in a similar way to searching DNA sequences for restriction sites. This output is designed so that you can copy the text and paste it into Microsoft Excel so that you can perform additional statistical analysis or combine plots for graphical display. In addition to the graphical display, the results can be viewed in tab-delimited text format. As with the DNA coding preference plots, you can zoom in to the residue level to closely examine interesting regions. The results can be viewed graphically using filled plots so that you can see at a glance if a protein is above or below the average for the displayed analysis. MacVector is a comprehensive Macintosh sequence analysis application that provides sequence editing, primer design, internet database searching, protein. The available algorithms in the Protein Analysis Toolbox are: All are accessed through a single Protein Profile Analysis dialog.
These range from simple composition reports (counts of each amino acid, pI and molecular weight) to hydrophobicity, antigenicity and secondary structure predictions. MacVector provides a variety of algorithms that you can use to analyze the composition of protein sequences. In addition to the single sequence analyses present below, you can also align multiple proteins using ClustalW and scan databases for related proteins over the Internet or locally on your own file system. MacVector provides a wide range of tools for analyzing Protein sequences.
Sequence Analysis Tools for Molecular Biologists
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